SynaCompare  
 
Compare type One-vs.-One     One-vs.-All    
  Query type  
1.  Query sequence  
Select a sequence from
a sequence database
Sequence expression
or Query sequence
(in raw or FASTA format)

2.  Target database
SynaBASE
Target sequence  
3.  Options
Word size
Repeat filter
Yes
No
  Window length      Indels     Score    
4.  Advanced options
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