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User guide
Retrieve result (by Job ID)
Query
Query type
Nucleotide - Nucleotide
Nucleotide - Protein
Protein - Protein
Query sequences
Query Sequence Input (FASTA format)
Upload Query File
Sequence Search by Keyword
Total query
SynaBASE
Keyword
Sequence list
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of
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Double-click to select the sequence(s) of interest
Selected sequence expression
Query input (FASTA format)
File upload
Job title
Job ID: 61849825086
(Job ID is used for result retrieval)
Target database
SynaBASE
Word size
Report options
Bit score threshold
E-value cut-off
Format
Pairwise alignment view
Hit table alignment view
BLAT's psl format
Maximum results reported per query
5
10
15
20
30
40
50
Advanced options -
Show
Scoring options
Gap cost
Match mismatch score
1, -2
1, -3
1, -4
2, -3
4, -5
Matrix
AG-CT
BLOSUM45
BLOSUM62
BLOSUM80
PAM30
PAM70
Direction
Rev-Complt
Filter options
Indels
Score
Window length
Repeat filter
Off - MRF 0.0
Weak - MRF 10.0
Low - MRF 3.0
Medium - MRF 2.0
Strong - MRF 1.0
Overlap filter
0
5
10
15
20
25
30
Be notified by email
(An email will be sent to the address provided when the results are available)
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